Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., pseudouridine synthase from Enterobacter asburiae PDN3

 Score = 82.4 bits (202), Expect = 9e-21
 Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 17/164 (10%)

Query: 65  KVILFNKPYDTLSQFTDGDGRKTLADYIP-IKDV--YAAGRLDRDSEGLLILTNDGILQA 121
           +V+ + KP   L    D +GR T+ D +P ++     A GRLD ++ GLL+ T DG L  
Sbjct: 68  RVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELAN 127

Query: 122 RLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPV 181
           RL  P  +  + Y V+V G   E+ L  L  GV L+DGP     +       +       
Sbjct: 128 RLMHPSREVEREYAVRVFGQVDENKLRDLSRGVQLEDGPAAFKTIKFTGGEGI------- 180

Query: 182 RFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGD 225
                    W  +TL EGRNR+VRR+   +G    RLIR   GD
Sbjct: 181 -------NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGD 217