Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Escherichia coli ECRC62

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 65  KVILFNKPYDTLSQFTDGDGRKTLADYIP-IKDV--YAAGRLDRDSEGLLILTNDGILQA 121
           +V+ + KP   L    D +GR T+ D +P ++     A GRLD ++ GLL+ T DG L  
Sbjct: 68  RVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELAN 127

Query: 122 RLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPV 181
           RL  P  +  + Y V+V G   ++ L  L  GV L+DGP     +       +       
Sbjct: 128 RLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI------- 180

Query: 182 RFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNL-GDLQPGEWREVT 240
                    W  +TL EGRNR+VRR+   +G    RLIR   GD  L   L  G W E+ 
Sbjct: 181 -------NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELD 233

Query: 241 L 241
           L
Sbjct: 234 L 234