Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Dickeya dianthicola ME23

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 62/181 (34%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 65  KVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVY---AAGRLDRDSEGLLILTNDGILQA 121
           +V+++ KP   L   +D +GR T+ D +P    Y   A GRLD ++ GLL+ T DG L  
Sbjct: 68  RVLMYYKPEGELCTRSDPEGRPTVFDRLPRIQGYRWVAVGRLDVNTSGLLLFTTDGELAN 127

Query: 122 RLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPV 181
           RL  P  +  + Y V+V G   +  +  L  GV L+DGP     +       L       
Sbjct: 128 RLMHPSREVEREYAVRVFGEVGDDKIRQLSKGVQLEDGPAAFRSIRYQGGEGL------- 180

Query: 182 RFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQP-GEWREVT 240
                    W  +TL EGRNR+VRR+   +G    RLIR   GD  L    P G W E+ 
Sbjct: 181 -------NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIQLPKGVPRGGWMEMG 233

Query: 241 L 241
           L
Sbjct: 234 L 234