Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  149 bits (377), Expect = 3e-41
 Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 8/174 (4%)

Query: 71  KPYDTLSQFT-DGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSK 129
           KP+  LSQF+ +    K + D +P  DVY  GRLD+DSEGLL+LTND  L   L  PQ  
Sbjct: 9   KPFGILSQFSGEAHTLKAIGD-LP-SDVYPVGRLDKDSEGLLLLTNDKALNHHLLHPQFG 66

Query: 130 APKTYWVQVEGSPQESDLEALRHGVTLK-DGP---TLPAKVDIMPEPTLWP-RNPPVRFR 184
             +TY  QVEG+P E+ L +L  GV +K DG    T PAK ++     L P R+PP+R+R
Sbjct: 67  HRRTYLAQVEGAPDEAALRSLESGVAIKVDGKVYHTKPAKANLKNNAPLLPERDPPIRYR 126

Query: 185 AAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWRE 238
             +P  W+ +TL+EG+NRQVR+MTA +G+PTLRL+R+SM D  +   + GE RE
Sbjct: 127 KTVPDAWVELTLIEGKNRQVRKMTAAVGYPTLRLVRWSMEDLTIAGFEVGEVRE 180