Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 19/185 (10%)

Query: 59  LSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPI---KDVYAAGRLDRDSEGLLILTN 115
           ++P +   +L NKP D ++   D   RKT+   +     + ++  GRLDR++ GLL+ TN
Sbjct: 201 INPEKPVYVLLNKPKDFITTTDDPMNRKTVMHLVSSACEERIFPVGRLDRNTTGLLLFTN 260

Query: 116 DGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLW 175
           DG L A+L+ P  K  K Y V ++    ++  E +  G+TL+DG      + I+ +    
Sbjct: 261 DGELAAKLSHPAEKVRKIYQVTLDSPITKTHFEEIAEGLTLEDGLVNVDDIQILSK---- 316

Query: 176 PRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGE 235
                         T L + +  G+NR VRR+ AH+G+  + L R +       DL  G+
Sbjct: 317 ------------DRTILGLEIHVGKNRIVRRIFAHLGYEVVALDRVTYAGLTKKDLSRGK 364

Query: 236 WREVT 240
           WR +T
Sbjct: 365 WRFLT 369