Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ribosomal large subunit pseudouridine synthase F from Caulobacter crescentus NA1000 Δfur

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 18/140 (12%)

Query: 101 GRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGP 160
           GRLD+DS GLL+L+ DG++   +  PQS+  K Y V V G   E  LE LR G+ L    
Sbjct: 124 GRLDKDSRGLLLLSQDGVVAKAVIGPQSELEKEYRVAVMGELTEEKLELLRFGLELDGRE 183

Query: 161 TLPAKVDIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIR 220
             PA+V+++ +                    L+  L EGRNRQ+RRM   +    + L R
Sbjct: 184 LRPAEVEVISDQR------------------LSFVLREGRNRQIRRMCELVDLKVVDLFR 225

Query: 221 YSMGDWNLGDLQPGEWREVT 240
             +G  +LGD+  G WR +T
Sbjct: 226 VRVGPLDLGDMPEGHWRLLT 245