Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., transporter, NhaC family (TC 2.A.35) from Kangiella aquimarina DSM 16071

 Score =  237 bits (605), Expect = 6e-67
 Identities = 159/491 (32%), Positives = 263/491 (53%), Gaps = 50/491 (10%)

Query: 11  LSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKEGAI 70
           LS+LPP+VA+ +A+  R+V+++L + IF   L+L   +   +      ++ SVF      
Sbjct: 4   LSILPPIVAILIAVWKRQVIIALLMAIFTAELVLVGGNPIHAFTDTVDRLVSVFS----- 58

Query: 71  NAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVR--VKSKRGSKLLAAFLGVFIFVD 128
           +A+N  I+ F LL+G +  L+ +SGG  A   W   +  V ++R + +L   LG  IF+D
Sbjct: 59  SAYNTRILMFSLLIGALIQLIKISGGVSALVNWLTRKEYVHNQRRAGMLPTILGSSIFID 118

Query: 129 DYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIGGILVS 188
              + L  G  S+ + D+F +SRA+LAYI+DST AP+ V++  + WGA I+  +    V+
Sbjct: 119 TNMSVLTAGLSSQALFDKFKMSRARLAYIIDSTCAPISVLILLNGWGAAILGHVEKTGVT 178

Query: 189 HGIEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQGRGFDEDPS 248
           +  E        +  + +NFYAI  LL+VF  V+     G M+  E  A +       P+
Sbjct: 179 NPTE------VLVTSIGLNFYAIVTLLIVFYTVYTGKVYGPMKAEESKALEVPSEPLPPA 232

Query: 249 TDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAESGQSFDIFG 308
           T  +                     ++ P+ F+V++ +  M  TG   L +   S     
Sbjct: 233 TKKRY--------------------MLWPLAFMVLSILVFMFITGDGDLRKGSGS----- 267

Query: 309 AFENTNVGTSLVYGGLVGLAMAFVTV-LRQKLPTAEIAKTLWIGAKSMFGAILILIFAWT 367
                    S+++  ++   + F  +    K  T E+ +  + G   +   + +++ A+ 
Sbjct: 268 --------ESVLWSVILSTLLIFALLRFDAKRKTKELMEESFKGLGHLLPLVTLVLLAFA 319

Query: 368 IGSVIGDMKTGAYLSSLVQGNIDPHWL-PVILFVLSGAMAFSTGTSWGTFGIMLPIAGDM 426
           +   + D+KTG +++  V G+  P W+ P ++FVL+G ++F+TGTSWGTFGI++PIA  +
Sbjct: 320 LSDSMTDLKTGEFVAGAV-GDFLPLWIIPALIFVLAGFISFTTGTSWGTFGILIPIAIPL 378

Query: 427 AGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPYALAVAL 486
           A +  I+  L +L AVL GSVFGDH SPISDTT++SS  A C  +DHV TQLPYAL    
Sbjct: 379 AVSLGISPSL-VLAAVLGGSVFGDHASPISDTTVISSLAAGCDLLDHVKTQLPYALFAGG 437

Query: 487 VSAIGYVVLGI 497
           +S + Y++ G+
Sbjct: 438 ISIVLYIIFGL 448