Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., DNA-binding protein H-NS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  117 bits (293), Expect = 6e-32
 Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 2/135 (1%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           M+ + + L NIR+LRA ARE +I+ LEE L+K   V +ER+E E  +    AE++ K+ A
Sbjct: 1   MNLMLQNLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEELQQRQLAEKQEKINA 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
             E +  DGI+ E L  A+       AK KR PRPAKY++ D NGEEKTWTGQGRTP  I
Sbjct: 61  FLELMKADGINPEELF-AMDSAMPRSAK-KRQPRPAKYRFTDFNGEEKTWTGQGRTPKPI 118

Query: 123 QKALDEGKSLEEFAL 137
            +AL  GKSL++F +
Sbjct: 119 AQALAAGKSLDDFLI 133