Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., H-NS histone family protein from Erwinia tracheiphila SCR3

 Score =  140 bits (354), Expect = 5e-39
 Identities = 74/135 (54%), Positives = 98/135 (72%), Gaps = 2/135 (1%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           MSE  K L NIR+LRA ARE+++ +LE+ L+KL  +V ER+EAEA   +   E+E KLA 
Sbjct: 1   MSETLKVLNNIRTLRAQAREVSLTELEDMLEKLEAIVNERREAEAAIASEIKEKEEKLAK 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
             + +  DGIDL  L SA S   KT+A  KRAPRPAKY+Y D NGE K+WTGQGRTP+VI
Sbjct: 61  YRQMLLDDGIDLSELTSAESTSGKTRA--KRAPRPAKYQYTDENGEVKSWTGQGRTPAVI 118

Query: 123 QKALDEGKSLEEFAL 137
           ++AL++GK L++F +
Sbjct: 119 KQALNQGKPLDDFLI 133