Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., DNA-binding protein H-NS from Enterobacter asburiae PDN3

 Score =  120 bits (302), Expect = 6e-33
 Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           MS   + L NIR+LRA AREL+++ LEE L+K+  V +E++    E    RAEQ+ K+ A
Sbjct: 1   MSLTLQNLNNIRTLRAMARELSLDVLEEMLEKVRVVTEEKRSELTELEQQRAEQQEKINA 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
           + E +  DGI    L+ +   +T   AK KR PR AKY++ID NGEEKTWTGQGRTP  I
Sbjct: 61  LLELMKADGISPTDLLGSELAQTGKPAK-KRKPREAKYRFIDQNGEEKTWTGQGRTPKPI 119

Query: 123 QKALDEGKSLEEFAL 137
             AL +GKSL++F +
Sbjct: 120 ASALADGKSLDDFLI 134