Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 146 a.a., DNA-binding protein from Escherichia coli ECRC62

 Score = 53.1 bits (126), Expect = 2e-12
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 13/135 (9%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           ++ +  +LLN   +R    E++ E   +  D L   +++R E +             LA 
Sbjct: 13  LATVRTSLLNSNLVRKLIMEMSDEDFNQVKDNLEKAIEQRNELKDS-----------LAI 61

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
           I + +   G+  E +      + +T  K        KY+Y + NG+   W+GQGR PSVI
Sbjct: 62  IKKYMDDAGVTAEDVYREFGKKLQTGRKNDSG-ESNKYRY-EYNGQIMYWSGQGRRPSVI 119

Query: 123 QKALDEGKSLEEFAL 137
            +A+  G SL++F +
Sbjct: 120 AEAIKAGGSLDDFLI 134