Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., DNA-binding transcriptional regulator H-NS from Dickeya dianthicola ME23

 Score =  133 bits (334), Expect = 1e-36
 Identities = 74/136 (54%), Positives = 93/136 (68%), Gaps = 2/136 (1%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           MSE  K L NIR+LRA ARE ++E LEE L+KL  VV ER+E + +  A   E+  KL  
Sbjct: 1   MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEDNQAQAEIEERTRKLQQ 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
             E +  DGID   L+ +L G +K   K KRA RPAKY+Y D NGE KTWTGQGRTP+VI
Sbjct: 61  YREMLIADGIDPNELLQSL-GSSKVAGKAKRAARPAKYQYTDENGELKTWTGQGRTPAVI 119

Query: 123 QKALDE-GKSLEEFAL 137
           +KA++E GKSL++F L
Sbjct: 120 KKAVEEQGKSLDDFLL 135