Pairwise Alignments

Query, 137 a.a., DNA-binding protein H-NS from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., DNA-binding transcriptional regulator H-NS from Dickeya dadantii 3937

 Score =  134 bits (338), Expect = 4e-37
 Identities = 75/136 (55%), Positives = 93/136 (68%), Gaps = 2/136 (1%)

Query: 3   MSEITKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEIAARAEQEAKLAA 62
           MSE  K L NIR+LRA ARE ++E LEE L+KL  VV ER+E E +  A   E+  KL  
Sbjct: 1   MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEENQAQAEIEERTRKLQQ 60

Query: 63  IAEQIAKDGIDLEALISALSGETKTKAKGKRAPRPAKYKYIDTNGEEKTWTGQGRTPSVI 122
             E +  DGID   L+ +L G +K   K KRA RPAKY+Y D NGE KTWTGQGRTP+VI
Sbjct: 61  YREMLIADGIDPNELLQSL-GSSKVAGKAKRAARPAKYQYTDENGELKTWTGQGRTPAVI 119

Query: 123 QKALDE-GKSLEEFAL 137
           +KA++E GKSL++F L
Sbjct: 120 KKAIEEQGKSLDDFLL 135