Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., tRNA-specific 2-thiouridylase MnmA from Xanthobacter sp. DMC5

 Score =  191 bits (486), Expect = 2e-53
 Identities = 125/370 (33%), Positives = 192/370 (51%), Gaps = 25/370 (6%)

Query: 13  KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEY---CTAAEDLADAQAVCD 69
           +V+V MSGGVDSSV A LL + GY V G+ ++ ++  +       C A +D+ DA  V  
Sbjct: 21  RVVVAMSGGVDSSVVAALLARAGYDVVGVTLQLYDHGEAAHRAGSCCAGQDIYDASEVAR 80

Query: 70  KLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADY 129
            LGIP + +++ + + + V + F A Y AG TP P + CN+ +KF+  L  A+E L A +
Sbjct: 81  TLGIPHYVLDYESRFREEVIDRFAASYAAGVTPIPCVDCNRTVKFRDLLATAEE-LGARF 139

Query: 130 IAMGHYVR-RTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRR 188
           +A GHYV  R  P  G    + R  +  +DQSYFLY  +  Q+ +  FP+GE++K +VR 
Sbjct: 140 LATGHYVASRALPGGGRG--LFRAAEEARDQSYFLYATTAAQLDKLRFPLGEMQKADVRA 197

Query: 189 IAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLP--AQPGKIETPEGKVIGEHQGLMYH 246
           +A E GL  A+K DS  ICF+    + + + R  P   + G I   +G+V+G H+G++++
Sbjct: 198 LAAEFGLPVAEKPDSQDICFVPGGDYAEVVQRLRPEAGEAGDIVHLDGRVLGRHKGVLHY 257

Query: 247 TLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRT 306
           T+GQRKGL I     ++ +P YV   D  R     V+      L    +  A ++W+   
Sbjct: 258 TIGQRKGLGI-----ATPEPLYVISIDASRR---EVRVGPREALAVRAISMADVNWLGDI 309

Query: 307 PITEPVRCS----VKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQ---- 358
           P    +       VK R  +  +   +   +D    V     +  V PGQ+ V Y     
Sbjct: 310 PFAAALDAEAEVYVKVRSTRPPVPARLGRTADGTPAVHLALGEEGVAPGQACVLYDAPGA 369

Query: 359 GEICLGGGII 368
           G   LGGG I
Sbjct: 370 GARLLGGGTI 379