Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., tRNA 2-thiouridine(34) synthase MnmA from Variovorax sp. OAS795

 Score =  404 bits (1038), Expect = e-117
 Identities = 207/367 (56%), Positives = 260/367 (70%), Gaps = 10/367 (2%)

Query: 10  SQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQAVCD 69
           ++++++VG+SGGVDS+V+A+LLKQQG++V G+FMKNWE+DD+ EYC++  D  DA AV D
Sbjct: 3   AKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNIDFVDAAAVAD 62

Query: 70  KLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADY 129
            LGI +  +NFAA+Y D VF  FL EYKAGRTPNPD+LCN EIKFKAFL+ A   L A  
Sbjct: 63  VLGIEIEHVNFAADYKDRVFAEFLREYKAGRTPNPDVLCNAEIKFKAFLDHAMR-LGAGK 121

Query: 130 IAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRI 189
           IA GHY R    +   K ++L+GLD +KDQSYFL+ L+  Q+++TLFPVGEL K EVRRI
Sbjct: 122 IATGHYARVRLNEATGKHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKTEVRRI 181

Query: 190 AEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEHQGLMYHTLG 249
           AEE GL  AKKKDSTGICFIGER F +FL+RY+  +PG I+   G+ +GEHQGL ++TLG
Sbjct: 182 AEEIGLPNAKKKDSTGICFIGERPFREFLNRYISKEPGPIKDDRGRKLGEHQGLSFYTLG 241

Query: 250 QRKGLHIGGMKESSEQ-------PWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHW 302
           QR+GL IGG+K+   Q       PW+VA KD+++N L  VQG DHP L S  L A    W
Sbjct: 242 QRQGLGIGGVKDKGAQRGSGDHSPWFVARKDVEKNTLWVVQGHDHPWLLSSALAAGDASW 301

Query: 303 VDRTPITEPVRCSVKTRYRQSDIACTI-IPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEI 361
           V       P     K RYRQ+D AC +  P  D+   + F EPQ AVTPGQSAV Y GE 
Sbjct: 302 VS-GEAPAPGGYGSKARYRQADAACEMDAPAGDEAFSLRFGEPQWAVTPGQSAVLYDGER 360

Query: 362 CLGGGII 368
           CLGGG+I
Sbjct: 361 CLGGGVI 367