Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., tRNA-specific 2-thiouridylase MnmA from Pseudomonas putida KT2440

 Score =  501 bits (1290), Expect = e-146
 Identities = 245/360 (68%), Positives = 291/360 (80%), Gaps = 4/360 (1%)

Query: 10  SQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQAVCD 69
           ++ +VIVGMSGGVDSSVSA LL +QGYQVEGLFMKNWEEDD  EYCTA EDLADAQAVCD
Sbjct: 10  AKTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYCTAREDLADAQAVCD 69

Query: 70  KLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADY 129
           ++GI LHT NFAAEYWDNVFE+FL EYKAGRTPNPDILCN+EIKFKAFL++A   L AD 
Sbjct: 70  RIGIKLHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNREIKFKAFLDYALS-LGADL 128

Query: 130 IAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRI 189
           IA GHYVRR     G   ++L+GLD NKDQSYFL+ +  +++ARTLFPVGELEKPEVR I
Sbjct: 129 IATGHYVRRR--DTGALTELLKGLDPNKDQSYFLHAVGGQEIARTLFPVGELEKPEVRAI 186

Query: 190 AEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEHQGLMYHTLG 249
           AE+ GL TAKKKDSTGICFIGER+F+DFL +YLPAQPG IET EG+VIG H GLMYHT+G
Sbjct: 187 AEKHGLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGDIETTEGEVIGRHHGLMYHTIG 246

Query: 250 QRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRTPIT 309
           QR+GL IGG+K++S++PWYV  KDL RNVL+  QG +HP L S  L+A+++ WV+   + 
Sbjct: 247 QRQGLGIGGLKDASDEPWYVLHKDLARNVLVVGQGNEHPWLFSRALLASEIFWVNPVDLG 306

Query: 310 EPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEICLGGGIIE 369
            P + + K RYRQSD  CT +  +    + +FDEPQ AVTPGQS VFY GE+CLGGG+IE
Sbjct: 307 SPRQLTAKVRYRQSDQRCT-LERTASGYRAVFDEPQRAVTPGQSVVFYDGEVCLGGGVIE 365