Pairwise Alignments

Query, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tRNA-specific 2-thiouridylase MnmA from Azospirillum sp. SherDot2

 Score =  221 bits (562), Expect = 3e-62
 Identities = 130/366 (35%), Positives = 203/366 (55%), Gaps = 16/366 (4%)

Query: 13  KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEED---DNEEYCTAAEDLADAQAVCD 69
           +V+V MSGGVDSSV+A +L+++GY V G+ ++ ++          C A +D+ DA+ V D
Sbjct: 14  RVVVAMSGGVDSSVTAAVLREEGYDVVGITLQLYDHGLALQKPGACCAGQDIYDARQVAD 73

Query: 70  KLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADY 129
           ++GIP + +++   +  +V + F   Y  G TP P + CN+ +KF+  L  A + L A+ 
Sbjct: 74  RIGIPHYVLDYEGRFSQDVMDDFADSYLRGETPIPCVRCNQRVKFRDLLNTARD-LGAEA 132

Query: 130 IAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRI 189
           +A GHYVRR    +G   ++ R +D  KDQSYFL+  + EQ+    FP+G L KPE R +
Sbjct: 133 LATGHYVRRIAGPHGA--ELHRAVDPAKDQSYFLFATTREQLEFLRFPLGGLTKPETRAL 190

Query: 190 AEEQGLITAKKKDSTGICFIGERKFTDFLSRYLP--AQPGKIETPEGKVIGEHQGLMYHT 247
           AE  GL  A K DS  ICF+    + + +++  P   +PG I   +G+V+G H+G++++T
Sbjct: 191 AERHGLEVAAKPDSQDICFVPNGNYAEVVAKLRPGSVEPGDIVHVDGRVLGRHKGVVHYT 250

Query: 248 LGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRTP 307
           +GQRKGL IGG++   E+  YV   +  R  ++   G    L +S  +    ++W+   P
Sbjct: 251 VGQRKGLGIGGIRGQEEEALYVVRLEPARRRVVV--GPRRDLARSL-VTVRDVNWLGPDP 307

Query: 308 ITE-----PVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEIC 362
             +      +  SVK R  Q           D   +V   EPQ  + PGQ+ V YQG+  
Sbjct: 308 APDMADGAGIEVSVKLRSTQPAAPALWRAGPDGTARVELLEPQHGIAPGQACVVYQGDRV 367

Query: 363 LGGGII 368
           LGGG I
Sbjct: 368 LGGGWI 373