Pairwise Alignments

Query, 142 a.a., nuclear transport factor 2 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 140 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  114 bits (285), Expect = 6e-31
 Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 2/133 (1%)

Query: 10  AQFYQQLDKSQLHRLIEIYHPDVVFEDAAHRIEGFDALYQYFLNLYQNVHTCTFTIHEQY 69
           A+ +  L+K  L ++ E+Y  DV F D  H I G  A+ +YF  LY NV    F  H   
Sbjct: 9   AEGFATLNKDNLDQVAELYSEDVSFSDPMHDIHGLAAMRRYFGELYANVQDLHFDFHAFD 68

Query: 70  AVNEG-AFLVWTMHLRHPKLAKGEQVDVKGVSHLHFAEGKVTYHRDYFDMGEMLYEQLPV 128
            V  G  +LVWTM   HP+LA G  + V+G SHL + + KV  HRDYFD G +LYE LP+
Sbjct: 69  EVRPGEGYLVWTMSYSHPRLAAGRTIRVEGCSHLKWRD-KVYRHRDYFDAGALLYEHLPI 127

Query: 129 LGQVIRAIKRRLG 141
           +G+VI  +K+RLG
Sbjct: 128 MGRVIHWLKKRLG 140



 Score = 20.8 bits (42), Expect = 0.009
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 104 FAEGKVTYHRDYFDMGEMLYEQ 125
           FAEG  T ++D  D    LY +
Sbjct: 8   FAEGFATLNKDNLDQVAELYSE 29