Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., seryl-tRNA synthetase from Pseudomonas simiae WCS417

 Score =  512 bits (1319), Expect = e-150
 Identities = 258/431 (59%), Positives = 316/431 (73%), Gaps = 9/431 (2%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLDSKLLR+ L + A +LA RGF LDV  I  LEEQRK++Q   E LQ+ RN+ SK IGQ
Sbjct: 1   MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
               G+      +   +  +G +L   KVEL+ + ++LD+I   +PNIP ++VP G+D+ 
Sbjct: 61  AKQRGEDIAP--LMADVERMGTELSDGKVELEKIQSELDSILLGIPNIPHESVPIGEDED 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
            NVEV RWGTP  +DFE+KDHV LGE+  GLDF +A K++GARF +++G  AR+HRA+AQ
Sbjct: 119 GNVEVRRWGTPTAFDFEIKDHVALGELTGGLDFETAAKMSGARFALLRGPIARMHRALAQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FM++LHT +HGY E Y PYLV A  L GT QLPKF +DLF       K S +    L LI
Sbjct: 179 FMINLHTGEHGYEEAYTPYLVQAPALMGTSQLPKFEEDLF-------KISRDGEADLYLI 231

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEV +TN+V   ILD  +LP+K  AH+PCFRSEAG+ GRDTRG+IR HQFDKVE+VQ+
Sbjct: 232 PTAEVSLTNIVAGEILDAKQLPIKFVAHSPCFRSEAGASGRDTRGMIRQHQFDKVEMVQV 291

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
             P  SM ALE LT +AE+VLQLLELPYR + LCTGDMGF + KTYDLEVWVP+Q  YRE
Sbjct: 292 VEPSTSMEALEGLTANAERVLQLLELPYRVLALCTGDMGFSAVKTYDLEVWVPSQDKYRE 351

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSN  DFQARRMQARFR     KPELVHTLNGSGLAVGRT+VA+LENYQ+ADG I +
Sbjct: 352 ISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRV 411

Query: 421 PAVLQKYMGGL 431
           P VL+ YM G+
Sbjct: 412 PEVLKPYMAGV 422