Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., Seryl-tRNA synthetase (EC 6.1.1.11) from Sphingobium sp. HT1-2

 Score =  434 bits (1115), Expect = e-126
 Identities = 229/434 (52%), Positives = 291/434 (67%), Gaps = 12/434 (2%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           M D + +R       A LARRG       I  L+E+ ++++ E++  Q+ RN  SK IGQ
Sbjct: 1   MHDIRFIRENSAAFDAALARRGLAPLSADILALDEKSRALKTELQQGQARRNEASKAIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
            MA+ D A AEA+K ++  L +   A + E   V A L+A+   +PN+P D VP G D++
Sbjct: 61  AMAAKDMAKAEALKAEVAALKEGTPALEAEEAEVGAALNAMLAAIPNLPADDVPQGADEA 120

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
            NVE+SRWGT + +DF  +DH D G    GLDF     ++GARF  ++GQ ARLHRA+AQ
Sbjct: 121 GNVELSRWGTIRAFDFAPQDHADFGP-ALGLDFEGGAALSGARFTALRGQMARLHRALAQ 179

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           +MLD  T  +GY E   P LV  E LFGTGQLPKF +DLF T                LI
Sbjct: 180 YMLDTQTGTNGYEETNPPLLVRDEALFGTGQLPKFAEDLFRTTD-----------GRWLI 228

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEV +TNLV + I+    LP+++TA TPCFRSEAGS GRDTRG IR HQF+KVELV I
Sbjct: 229 PTAEVSLTNLVAEQIVPTDALPVRLTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVAI 288

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
             PE+S A  E +   AE +LQ L LPYRK++LC+GDMGFG+ KTYDLEVW+P+Q TYRE
Sbjct: 289 CAPEESDAEHERMVQAAEGILQALNLPYRKMLLCSGDMGFGARKTYDLEVWLPSQATYRE 348

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISS SN  DFQARRM AR++ +GEK    +HTLNGSGLAVGRT+VA+LENYQ+ADG + +
Sbjct: 349 ISSVSNCGDFQARRMNARYKPEGEKATRFLHTLNGSGLAVGRTLVAVLENYQQADGSVIV 408

Query: 421 PAVLQKYMGGLTHI 434
           P VL  YMGG+T +
Sbjct: 409 PEVLAPYMGGITKL 422