Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Seryl-tRNA synthetase (EC 6.1.1.11) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  502 bits (1293), Expect = e-147
 Identities = 255/438 (58%), Positives = 322/438 (73%), Gaps = 6/438 (1%)

Query: 1   MLDSKLLRTELDETAAKLARRGFK---LDVETIRTLEEQRKSIQVEVENLQSTRNSISKQ 57
           MLD   LR +LD   A+L  R      LDV   + LE +RK++Q   E+LQS RN++SKQ
Sbjct: 1   MLDIVQLRKDLDGVVARLQTRKQPQPYLDVPAYQALESERKALQTHTEDLQSRRNALSKQ 60

Query: 58  IGQLMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGK 117
           IG L   G  A AEA   Q+  L  +LDA    LD + A+L  + + VPN+P ++VP G 
Sbjct: 61  IGMLKGKGLHAEAEAAMAQVTALKAELDASTARLDVIQAELQNLLRAVPNLPHESVPVGD 120

Query: 118 DDSENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRA 177
           D++ NVE+ RWGTP+T+DFE++DHVD+GE   GLDF + TK+ G+RF  M+G  ARLHRA
Sbjct: 121 DENGNVELRRWGTPRTFDFELRDHVDIGEKL-GLDFETGTKLAGSRFTFMRGPIARLHRA 179

Query: 178 IAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASD-EEPRR 236
           +AQFMLD+ T +HGYTE Y PY+VNAETL GTGQLPKF  D+F  +   ++  +  + + 
Sbjct: 180 LAQFMLDVQTQEHGYTECYTPYIVNAETLLGTGQLPKFEGDMFAVKKGGQEGEEVPDTQA 239

Query: 237 LSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVE 296
           L LI T+E+ +TN VRDT+L EAELP+++TAHTPCFRSEAGS GRDTRG+IR HQFDKVE
Sbjct: 240 LYLISTSEITLTNTVRDTVLVEAELPIRLTAHTPCFRSEAGSAGRDTRGMIRQHQFDKVE 299

Query: 297 LVQITRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQK 356
           +VQI  PE S  AL+ +TGHAE VLQ L LPYR ++LCTGDMGFGS +T+DLEVWVPAQ 
Sbjct: 300 MVQIVHPEKSYEALDAMTGHAEAVLQKLGLPYRVIVLCTGDMGFGSTRTHDLEVWVPAQG 359

Query: 357 TYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADG 416
           TYREISS SN   FQARR+QARF +  + K ELVHTLNGSGLAVGRT+VA+LEN+Q ADG
Sbjct: 360 TYREISSVSNCEAFQARRLQARF-KNAQGKNELVHTLNGSGLAVGRTLVAVLENFQNADG 418

Query: 417 RIAIPAVLQKYMGGLTHI 434
            + +P VL+ Y+GGL  +
Sbjct: 419 SVTVPEVLRPYLGGLERL 436