Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., seryl-tRNA synthetase (EC 6.1.1.11) from Enterobacter asburiae PDN3

 Score =  621 bits (1601), Expect = 0.0
 Identities = 304/435 (69%), Positives = 359/435 (82%), Gaps = 5/435 (1%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           MLD  LLR E D  A KLARRGFKLDV+ +R LEE+RK +QV+ ENLQ+ RNS SK IGQ
Sbjct: 1   MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
             A G+    E ++ ++  LG++LD  K ELD + A++  I   +PNIPDD+VP GKD++
Sbjct: 61  AKARGEDI--EPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDEN 118

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
           +NVEV RWGTP+ +DFEV+DHV LGEM  GLDFA+A K+TG+RFVVMKGQ A LHRA+AQ
Sbjct: 119 DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQ 178

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FMLDLHT+QHGY+E YVPYLVN +TL+GTGQLPKF  DLFHT PL E+A        +LI
Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSN---YALI 235

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEVP+TNLVRD I+DE +LP+K+TAH+PCFRSEAGSYGRDTRGLIRMHQFDKVE+VQI
Sbjct: 236 PTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQI 295

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
            RPE+SM ALEE+TGHAEKVL+LL LPYR++ LCTGDMGFG+CKT+DLEVWVPAQ TYRE
Sbjct: 296 VRPEESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYRE 355

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCSN+WDFQARRMQAR R K +KK  LVHTLNGSGLAVGRT+VA+LENYQ+ADGRI I
Sbjct: 356 ISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEI 415

Query: 421 PAVLQKYMGGLTHIG 435
           P VL+ YM G  +IG
Sbjct: 416 PEVLRPYMKGQQYIG 430