Pairwise Alignments

Query, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., seryl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  394 bits (1011), Expect = e-114
 Identities = 211/434 (48%), Positives = 281/434 (64%), Gaps = 11/434 (2%)

Query: 1   MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60
           M D K +R   +   A LARR  +     +  L+E+R+S+   ++++QS RN+ SK+IG 
Sbjct: 1   MHDIKWIRENPEAFDAALARRSVEPAAAGLIALDEKRRSVIQSLQDMQSRRNAASKEIGA 60

Query: 61  LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120
            MA  +   AE +K ++  + +++   + E   V A+L+     +PN+P D VP+GKD+ 
Sbjct: 61  AMAQKNMELAEKLKAEVADIKENMPRAEEEDRQVSAELNDALSRLPNMPFDDVPDGKDEH 120

Query: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180
           +NV     G    ++   K+H ++GE    +DF  A K++G+RF V+  Q ARL RA+ Q
Sbjct: 121 DNVVARVTGQKPGWNHAAKEHFEIGEALGYMDFERAAKLSGSRFTVLTSQLARLERALGQ 180

Query: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240
           FM+DLHT +HGYTE+  P +V  E +FGTGQLPKF +DLF T                LI
Sbjct: 181 FMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFAEDLFRTTD-----------GRWLI 229

Query: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300
           PTAEV +TNLV   IL++ +LPL+ TA TP FRSEAGS GRDTRG++R HQF K ELV I
Sbjct: 230 PTAEVTLTNLVSGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289

Query: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360
           T  E ++A  E +T  AE+VL+ L L +R + LCTGDMGF + KTYDLEVW+P Q TYRE
Sbjct: 290 TDAESAVAEHERMTACAEEVLKRLGLHFRTLTLCTGDMGFSARKTYDLEVWLPGQNTYRE 349

Query: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420
           ISSCS   DFQARRM AR+R K +K  + VHTLNGSG AVGR ++A+LENY   DG + I
Sbjct: 350 ISSCSVCGDFQARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLENYLNDDGSVTI 409

Query: 421 PAVLQKYMGGLTHI 434
           P VL  YMGGLT I
Sbjct: 410 PDVLLPYMGGLTRI 423