Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Holliday junction branch migration DNA helicase RuvB from Rhodanobacter sp000427505 FW510-R12

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 55/268 (20%)

Query: 13  DFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEA-----GHIHSMILWGPPGTGKTTL 67
           D   L A +RP+ + +Y+GQQ +    + L   +EA     G +  ++++GPPG GKTTL
Sbjct: 14  DDEALEATIRPKRLAEYLGQQAVR---EQLSIYIEAAKKRGGALDHVLVFGPPGLGKTTL 70

Query: 68  AEVAANYANAEVERVSA-VTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFNKSQQDA 126
           + V AN     +   S  V     ++ A +     N       +LFVDE+HR +   ++ 
Sbjct: 71  SHVIANELGVNLRSTSGPVLERAGDLAALLTNLEAN------DVLFVDEIHRLSPLVEEV 124

Query: 127 FLPHIEDGTV--------------------TFIGATTENPSFELNNALLSRARVYKLTSL 166
             P +ED  +                    T IGATT   +  L   L  R  + +    
Sbjct: 125 LYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLIGATTR--AGMLTAPLRDRFGIVQRLEF 182

Query: 167 NQQEILQAL----------------HQAIADTERGLGKVAAVFADNVLDRLAELVNGDAR 210
              + L A+                 Q IA   RG  ++A      V D  AE V     
Sbjct: 183 YTADELTAIVRRAARILGIVCAPEGAQEIARRSRGTPRIANRLLRRVRD-YAE-VRAGGE 240

Query: 211 MSLNYLELLYDMAREDDQGRKQIDLPLL 238
           ++L   +   DM + D QG  ++D  LL
Sbjct: 241 ITLAAAQAALDMLKIDPQGFDELDRRLL 268