Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

 Score =  498 bits (1283), Expect = e-145
 Identities = 255/440 (57%), Positives = 319/440 (72%), Gaps = 6/440 (1%)

Query: 8   FSGDEDFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTL 67
           F  D   +PLAAR+R   +++Y+GQ+H+L  GKPLR ALE G +HSMI WGPPG GKTTL
Sbjct: 4   FRSDPIAQPLAARLRSTNLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTL 63

Query: 68  AEVAANYANAEVERVSAVTSGVKEIRAAIEKARENKLS-GRRTILFVDEVHRFNKSQQDA 126
           A + A  ++A  E VSAV +GVKEIR A+E A++     G+RTILFVDEVHRFNKSQQDA
Sbjct: 64  ARLLAKVSDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQQDA 123

Query: 127 FLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGL 186
           FLP++EDGT+ FIGATTENPSFELNNALLSRARVY L SL++  + + L +A+++ ++GL
Sbjct: 124 FLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAAMQKLLQRALSE-DKGL 182

Query: 187 GKVAAVFADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKV 246
           GK     ++     L    +GD R  LN +E   D+A +  +    I + LL  + G+  
Sbjct: 183 GKRQLRVSEEGFKILLTAADGDGRRFLNLVENASDLAEDGSE----IGVDLLQSLLGDTR 238

Query: 247 SRFDNKGDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGN 306
            RFD  G+ +YD ISA+HKS+RGS+PD ALYW ARMI  GCDPLY+ARR++ +ASED+GN
Sbjct: 239 RRFDKGGEAFYDQISALHKSVRGSNPDGALYWFARMIDGGCDPLYLARRVVRMASEDIGN 298

Query: 307 ADPRGMQVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPE 366
           ADPR + + LAAWD   R+G  EGE A+AQAI YLACAPKSNAVY  +K AL  A     
Sbjct: 299 ADPRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYMGFKSALRAAAEYGS 358

Query: 367 FEVPPHLRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLET 426
            EVP HLRNAPT+LMK LGYG+EYRYAHDEP AYAAGE YFP ++     YQP PRGLE 
Sbjct: 359 LEVPMHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDDLEPLPLYQPVPRGLEL 418

Query: 427 KIAEKLAYLADLNAKSPQKR 446
           KI EKL +LA+L+  SP++R
Sbjct: 419 KIGEKLNHLAELDRLSPKQR 438