Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

 Score =  429 bits (1104), Expect = e-125
 Identities = 231/429 (53%), Positives = 296/429 (68%), Gaps = 10/429 (2%)

Query: 15  RPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANY 74
           +PLA R+RP+T+ + IGQQH+LGPG  LR A E+G  HS ILWGPPGTGKTT+A + A+ 
Sbjct: 7   QPLAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILWGPPGTGKTTIARLMADA 66

Query: 75  ANAEVERVSAVTSGVKEIRAAIE--KARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIE 132
            +A+   +SAV  GVK+IR A++   A  + L+ +RTI+FVDEVHRFNKSQQDAFLPH+E
Sbjct: 67  FDAQFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHVE 126

Query: 133 DGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGLGKVAAV 192
            G  TFIGATTENPSFE+N+ALLSRA VY L SLN+ ++ Q + +A     + +  V A+
Sbjct: 127 SGLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNEDDLKQIVTRA-----QDIQAVPAI 181

Query: 193 FADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFDNK 252
               V DRL    +GDAR  LN LE L   AR +      I    L  V GE++ R+D  
Sbjct: 182 DTAAV-DRLVAYADGDARRLLNTLETLAVAARAEKLSN--ISDEWLLRVLGERMRRYDKG 238

Query: 253 GDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGNADPRGM 312
           G+ +YD ISA+HKS+RGSDPDAALYW  RM+  G DP Y+ARRL+ +ASED+G ADPR +
Sbjct: 239 GEQFYDTISALHKSVRGSDPDAALYWFVRMLDGGADPRYMARRLVRMASEDIGLADPRAL 298

Query: 313 QVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPPH 372
           ++AL A + + R+G  EGE A+A+ +VYLA APKSNAVY A+    +         VP H
Sbjct: 299 RLALDAAEVYERLGTPEGELALAECVVYLAIAPKSNAVYKAYNAVRALVKKDSTRPVPMH 358

Query: 373 LRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLETKIAEKL 432
           LRNAPT+LMK+L YG+ YRYAHDE G +AAGE Y P  + G  +Y+P  RGLE +I EKL
Sbjct: 359 LRNAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGLEGQVFYEPVDRGLEIRIGEKL 418

Query: 433 AYLADLNAK 441
             L  LNA+
Sbjct: 419 RELRRLNAE 427