Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

 Score = 60.5 bits (145), Expect = 9e-14
 Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 64/286 (22%)

Query: 21  MRPQTVEQYIGQQHI-------LGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAAN 73
           +RP+ +++Y+GQ  +       +G  +  + AL+      ++L+GPPG GKTTL+ + A 
Sbjct: 32  LRPKLLDEYVGQAKVREQLEIFIGAARKRKEALD-----HVLLFGPPGLGKTTLSHIIAA 86

Query: 74  YANAEVERVSA-VTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIE 132
                + + S  V    K++ A +     N       +LF+DE+HR +   ++   P +E
Sbjct: 87  ELGVNLRQTSGPVLEKPKDLAALLTNLEPN------DVLFIDEIHRLSPVVEEILYPALE 140

Query: 133 DGTV--------------------TFIGATTENPSFELNNALLSR-ARVYKLTSLNQQEI 171
           D  +                    T +GATT   +  L N L  R   V +L     +E+
Sbjct: 141 DYQIDIMIGEGPAARSIKLDLQPFTLVGATTR--AGMLTNPLRDRFGIVARLEFYTPEEL 198

Query: 172 LQALHQA---------------IADTERGLGKVAAVFADNVLDRLAELVNGDARMSLNYL 216
              + ++               IA   RG  ++A      V D  AE V G+ R++ +  
Sbjct: 199 ALIVRRSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRD-YAE-VKGNGRITEDIA 256

Query: 217 ELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFDNKGDIWYDLISA 262
                M   D QG   +D  LL  V    + RFD  G +  D ++A
Sbjct: 257 HKALAMLDVDPQGFDLMDRKLLEAV----IHRFDG-GPVGLDNVAA 297