Pairwise Alignments

Query, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., ATPase related to the helicase subunit of the Holliday junction resolvase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  338 bits (867), Expect = 2e-97
 Identities = 186/420 (44%), Positives = 257/420 (61%), Gaps = 11/420 (2%)

Query: 16  PLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYA 75
           PLA RMRP  +E+ IGQ+H+   G  L RA+ +G + S+ILWGPPG GKTT+A + AN  
Sbjct: 5   PLAERMRPAKLEELIGQEHLSKEGTFLHRAIRSGTVPSLILWGPPGVGKTTIANIIANEV 64

Query: 76  NAEVERVSAVTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 135
            A    +SA++SGVK+IR  IEKAR  +      +LF+DE+HRFNKSQQDA L  +E G 
Sbjct: 65  KAPFYTLSAISSGVKDIRQVIEKARFQQ----GVVLFIDEIHRFNKSQQDALLGAVEKGH 120

Query: 136 VTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGLGKVAAVFAD 195
           +  IGATTENPSFE+N ALLSR +V+ L  L ++ +   +HQA+        K   +   
Sbjct: 121 IRLIGATTENPSFEVNAALLSRCQVFTLNHLEKESLEAMVHQAMEKDPLIKSKPIELKET 180

Query: 196 NVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFDNKGDI 255
             L RL+    GD R  LN  E++ +   +D      I    + E+A +KV+ +D  G+ 
Sbjct: 181 EALLRLS---GGDGRKLLNLFEIVVNAIPDDPI---VITNDKVTEIAQQKVAMYDKSGEQ 234

Query: 256 WYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGNADPRGMQVA 315
            YD+ISA  KSIRGSDP+AA+YW ARMI  G D  +IARRL+ +ASED+GNA+P  + +A
Sbjct: 235 HYDIISAFIKSIRGSDPNAAVYWLARMIEGGEDVKFIARRLVILASEDIGNANPNALLLA 294

Query: 316 LAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPPHLRN 375
              +D    +G  E    ++Q + YLA + KSNA Y A  +A +      +  VP HLRN
Sbjct: 295 TQCFDAVKIIGYPEARIILSQCVTYLASSAKSNASYVAINEAQAIVRQEGDLPVPIHLRN 354

Query: 376 APTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLETKIAEKLAYL 435
           APT+LMKDL YG+ Y+YAHD PG++   E + P ++ G + Y+P     E  + + L  L
Sbjct: 355 APTKLMKDLNYGKGYKYAHDYPGSFVEEE-FMPDKLKGKKLYEPGANARENDLRKNLQRL 413