Pairwise Alignments

Query, 198 a.a., outer membrane lipoprotein carrier protein LolA from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 6/194 (3%)

Query: 5   LALLFCSFSAIAAPKDTLSERLAMSEGFSATFNQQVLSPEGKVILTGNGKVDIARPSLFR 64
           LAL   S  A  A   +L   L  S+  +A F+Q  L   G  +    G++ + RP LF 
Sbjct: 12  LALTAVSAHADPASVASLKNLLDKSQTLTARFSQLTLDAGGTQLQETAGEMAVQRPGLFY 71

Query: 65  WETETPDENLLVSDGTTLWHFDPFVEQVTLYRAEEALEQTPFVLLTRNKASDWDAYHVEE 124
           W TE   E  +VSDG  +  +DP ++Q T+ + +  L QTP +LL+ + +   D++ +  
Sbjct: 72  WHTEGKAEQTIVSDGQKVTLWDPDLQQATIKKLDPRLNQTPALLLSGDVSKINDSFDITS 131

Query: 125 KGD----VFTLTPTALDSNQGRFQITISEKGVVQGFKVIEQDGQQSEFTFSKVKQQKP-N 179
           K       FTL P + D+      ++    GV+   ++++  GQ+++  FS VK  +P  
Sbjct: 132 KQTSNVIEFTLKPKSKDTLFDTLSLSFG-NGVINNMRLVDSVGQRTDILFSGVKANQPVP 190

Query: 180 ASVFNYKVPKGVEV 193
           A+ F + +PKG +V
Sbjct: 191 AAKFKFDIPKGADV 204