Pairwise Alignments

Query, 209 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 902 a.a., preprotein translocase subunit SecA from Agrobacterium fabrum C58

 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 18/117 (15%)

Query: 102 WPQVEPMWQQGAFADGSIRMLQALLTTLMLAIDEAQTQAQMREAGYEQVPALADLIEQLN 161
           + Q +P+ +  A A     + Q+LLT L     EA T   MR    +Q P   +L E   
Sbjct: 789 YAQRDPLQEYKAEA---FELFQSLLTNLR----EAVTAQLMRVELVQQEPQQPELPEMTA 841

Query: 162 LMVHEVALAADEAMLGAKAQSV--------NP--FKGIGRNDACPCDSGKKFKQCCG 208
             +  V    DE   G  A  V        NP  +  IGRN+ CPC SGKK+K C G
Sbjct: 842 HHLDPVT-GEDEMAQGVPAAFVPAEERDPNNPATWGRIGRNEMCPCGSGKKYKHCHG 897