Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas simiae WCS417

 Score =  104 bits (259), Expect = 3e-27
 Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 11/238 (4%)

Query: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62
           +IL PM GV D   R +  ++      V+E V        D   +       +       
Sbjct: 15  LILAPMAGVTDQPFRQLCKRLGA-GLVVSEMVT------SDMSLWNTRKSRMRMIHEGDP 67

Query: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122
            P  VQ+ G D   +A+ A    ELGA  ID+N GCPAK V     G+ALL+  +L+ ++
Sbjct: 68  EPRSVQIAGGDAQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQLVAEI 127

Query: 123 VKACRDAVPAHIPVSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEI 181
           ++A   AV   +PV+ KIR GW+ D ++   +     QA    L VH RT+A  Y   E 
Sbjct: 128 LQAVVAAV--DVPVTLKIRTGWDRDNKNGLTVAKIAEQAGITALAVHGRTRADLY-TGEA 184

Query: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
           ++  I  I+Q  S+P+ ANG++ +    +  +  TG D L++ R A   P +   ++H
Sbjct: 185 EYDTIAAIKQAVSMPVFANGDIDSAEKARRVLHATGADGLLIGRAAQGRPWIFREIEH 242