Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., tRNA-dihydrouridine synthase C from Pseudomonas simiae WCS417

 Score =  263 bits (671), Expect = 6e-75
 Identities = 133/308 (43%), Positives = 196/308 (63%), Gaps = 6/308 (1%)

Query: 1   MRVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTP 60
           M++ L PMEG++D+++RD+LT++   D+CVTEF+RV + LL    F++L PEL  G+ T 
Sbjct: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYFHKLAPELLHGAHTA 60

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
           +GVP++VQLLG DP  +AENA  A ELG+  IDLNFGCPAK VN+S+GGA LL+ PEL+ 
Sbjct: 61  AGVPLRVQLLGSDPVCLAENAALACELGSQVIDLNFGCPAKTVNKSRGGAVLLKEPELLN 120

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASE 180
           Q+V+  R AVPAHIPV+AK+RLG++ P+       A+A+  A  + VHARTK  GYK   
Sbjct: 121 QIVEHVRRAVPAHIPVTAKMRLGFDSPDGALVCATALAEGGAAHIVVHARTKTDGYK-PP 179

Query: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN 240
             W +I ++++   +P+ ANG++W+  D + C + +G + +M+ RG +  P+L   +   
Sbjct: 180 AHWEWIPRVQEVVKVPVFANGDIWSVEDWKRCREVSGAEDIMLGRGLVARPDLARQIAAA 239

Query: 241 HAA-----MPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELR 295
            A      M W E+  +L  +    V     +  P R+KQW A L   YP+A ELF  +R
Sbjct: 240 RAGEEVVEMTWAEMQPMLQEFWTQSVAQLTERQAPGRLKQWLAMLTRNYPEAVELFTLMR 299

Query: 296 TLTQVEPI 303
             T +E +
Sbjct: 300 RETDLEQV 307