Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., tRNA-dihydrouridine synthase DusB from Variovorax sp. SCN45

 Score =  105 bits (261), Expect = 2e-27
 Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 10/240 (4%)

Query: 2   RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPS 61
           R+ + PM GV D   R ML +     + V+E V     L      +      ++ +    
Sbjct: 13  RLFVAPMAGVTDRPFR-MLCRALGAGYAVSEMVTSRKEL------WGTLKTSRRANHDGE 65

Query: 62  GVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQ 121
             P+ VQ+ G D   MAE  +   E GA  ID+N GCPAK V     G+AL++   L  +
Sbjct: 66  PGPIAVQIAGTDADMMAEATVYNIERGAQIIDINMGCPAKKVCNKWAGSALMRDEPLALE 125

Query: 122 VVKACRDAV-PAHIPVSAKIRLGW-EDPEDCFEIVDAVAQAKADELTVHARTKAGGYKAS 179
           +V+A  DA  P ++PV+ K+R GW  D  +  ++      A    LTVH RT+  GYK  
Sbjct: 126 IVQAVVDAARPFNVPVTLKMRTGWSHDHRNAVKLARDFESAGVQMLTVHGRTREQGYK-G 184

Query: 180 EIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
             ++  I  ++    +P++ANG++ +    +  +  TG D++M+ R A   P +   + H
Sbjct: 185 HAEYDTIAAVKAAVRVPVVANGDIRSPEKARDVLAATGADAVMIGRAAQGRPWIFREIAH 244