Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 7e-28
 Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 16/258 (6%)

Query: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62
           +IL PM GV D   R +  ++      V+E V     L            + +G   P  
Sbjct: 15  LILAPMAGVTDQPFRTLCQRLGA-GMVVSEMVSSDMSLWNSRK--SSLRRIHEGDPEPRS 71

Query: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122
           V    Q+ G D   MA  A    E GA  ID+N GCPAK V     G+ALL+   L+ ++
Sbjct: 72  V----QIAGGDAQMMAAAAKANVEAGAQIIDINMGCPAKKVCNKAAGSALLRDEALVSEI 127

Query: 123 VKACRDAVPAHIPVSAKIRLGWEDP-EDCFEIVDAVAQAKADELTVHARTKAGGYKASEI 181
           + A   AV   +PV+ KIR GW+   ++   +     QA    L VH RT+A  Y   E 
Sbjct: 128 LHAVVSAV--DVPVTLKIRTGWDRANKNGLNVAKIAEQAGIQALAVHGRTRADLY-TGEA 184

Query: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH-- 239
           ++  I  I+Q  SIP+ ANG++ +    +A ++TTGVD L++ R A   P +   ++H  
Sbjct: 185 EYDTIGAIKQAVSIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYL 244

Query: 240 ---NHAAMPWHEVVDLLL 254
               H   P  + V+ +L
Sbjct: 245 RTGEHLPAPQLDEVERIL 262