Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., tRNA-U20-dihydrouridine synthase from Kangiella aquimarina DSM 16071

 Score =  116 bits (290), Expect = 8e-31
 Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 17/324 (5%)

Query: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62
           +IL PM GV D   R +  ++          + V  ++  +         +Q+ +     
Sbjct: 12  LILAPMAGVTDRPFRQLCKELG-------AGLTVSEMIAANPKLRNTRKSIQRSNHQGEP 64

Query: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122
               VQ+ G +P  +A++A    + GA  ID+N GCPAK V +   G+ALLQ P+L+  +
Sbjct: 65  GIRSVQIAGAEPEMLAQSAQYNVQNGAEIIDINMGCPAKKVCKKAAGSALLQDPKLVEDI 124

Query: 123 VKACRDAVPAHIPVSAKIRLGW-EDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEI 181
           + A   AV   +PV+ KIR GW  D  +  +I     QA    L VH RT+A  Y     
Sbjct: 125 LNAVVSAV--EVPVTLKIRTGWNHDNRNGVQIAQIAEQAGIQALAVHGRTRADKY-LGNA 181

Query: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH-- 239
           ++  I  I+Q  SIP++ANG++ +    +  +  TGVD LM+ RGA   P +   V H  
Sbjct: 182 EYDTIAAIKQSVSIPVVANGDITSPEKARFVLDYTGVDGLMIGRGAQGNPWIFREVWHYL 241

Query: 240 ----NHAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELR 295
                 +   W EV  +LL +             P   ++  ++       ANE      
Sbjct: 242 QTGEKLSPPSWQEVRQVLLGHINALHEFYGAVMGPRIARKHVSWYLQEQADANEFRRTFN 301

Query: 296 TLTQVEPIVDQLHRYRDQLHHAAA 319
            +      +D L RY +Q   A A
Sbjct: 302 AIEDGAEQLDVLDRYFEQKQQAIA 325