Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., putative TIM-barrel protein, nifR3 family from Enterobacter asburiae PDN3

 Score =  112 bits (281), Expect = 9e-30
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 13/240 (5%)

Query: 2   RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRV-VNLLLPDHVFYRLCPELQQGSKTP 60
           R+I  PM G+ D   R +  ++      V+E +     +   D    R+    + G +T 
Sbjct: 11  RLIAAPMAGITDRPFRTLCYEMGA-GLTVSEMMSSNPQVWESDKSRLRMVHVDEPGIRT- 68

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
                 VQ+ G  P  MA+ A    E GA  ID+N GCPAK VN+   G+ALLQ+P+ + 
Sbjct: 69  ------VQIAGSVPEEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDQVK 122

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWED-PEDCFEIVDAVAQAKADELTVHARTKAGGYKAS 179
            ++ A   AV   +PV+ KIR GW     +C EI           LT+H RT+A  +   
Sbjct: 123 AILTAVVSAV--DVPVTLKIRTGWSPVHRNCVEIAQLAEDCGIQALTIHGRTRACLFN-G 179

Query: 180 EIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239
           E ++  I  ++QK SIP+IANG++ +    +A +  TG D+LM+ R A   P +   ++H
Sbjct: 180 EAEYDSIRAVKQKVSIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQH 239