Pairwise Alignments

Query, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., putative tRNA-dihydrouridine synthase from Alteromonas macleodii MIT1002

 Score =  369 bits (946), Expect = e-107
 Identities = 181/312 (58%), Positives = 224/312 (71%), Gaps = 1/312 (0%)

Query: 1   MRVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTP 60
           M+V+L PMEGV+DHLMRDMLT++  +D CVTEFVRVV+  +P   FYRLCPEL  G KTP
Sbjct: 1   MKVMLAPMEGVVDHLMRDMLTRVGGFDQCVTEFVRVVDQKIPKKTFYRLCPELHNGGKTP 60

Query: 61  SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY 120
           +GVPV+VQLLGQ P W+AENA  A ELG+ G+DLNFGCPAK VN+SKGGA LL+  + +Y
Sbjct: 61  AGVPVRVQLLGQHPQWLAENAQTAIELGSPGVDLNFGCPAKTVNKSKGGAVLLKETQTLY 120

Query: 121 QVVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASE 180
            +VKA RDAVPA IPVSAKIRLG+ED     E   A+ +A A EL VHARTK  GYK   
Sbjct: 121 DIVKAVRDAVPAEIPVSAKIRLGFEDKSLAIENAIAITEAGASELVVHARTKTEGYKPPA 180

Query: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN 240
             W +I +I+Q   IPL+ANGE+WN  D Q C   +   +LM+ RGAL +PNL   +K  
Sbjct: 181 Y-WDWIAKIKQHTDIPLVANGEIWNAEDAQRCQSQSECTNLMIGRGALAMPNLAMSIKEG 239

Query: 241 HAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLTQV 300
            A MPW E+  LL++Y+ +E+ GDKGKYYPNRIKQW  YL+  YP+A  LF ++R LT+ 
Sbjct: 240 VAPMPWSELAALLIQYSGYEIFGDKGKYYPNRIKQWCGYLKRQYPEAEVLFNDIRRLTKS 299

Query: 301 EPIVDQLHRYRD 312
           + IVD L R  D
Sbjct: 300 QDIVDVLARQAD 311