Pairwise Alignments

Query, 489 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  100 bits (249), Expect = 1e-25
 Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 13/198 (6%)

Query: 302 SGNLLVVALVYLFLTGVL---IYLNTRWDRQHYAQLAARDPMTGLLNRRGMESFLK---- 354
           SG   V+ L  L+LT +L   + L  R +R+  AQLAA D +TG+ NRR ++  L+    
Sbjct: 304 SGATGVLCLGLLWLTWLLARELRLRHRAERE-LAQLAATDDLTGVANRRMLDQTLRHEWF 362

Query: 355 -GKRHSQYLAIAVLDIDDFKQINDAYGHDMGDRVICYIGEQIENHI-RSSDAVARFGGEE 412
             +R  Q L++ ++D D FK  ND +GH  GD+V+  + + I  ++ R +D VAR+GGEE
Sbjct: 363 RAQRSGQPLSVMMIDADHFKAFNDRHGHQAGDQVLRELAKVITANVRRPADLVARYGGEE 422

Query: 413 FVVYVTAKEKEQITRIMQRIFDAVCRESPLI--LEPGFTISGGIEVVESTTDRSFEDLFK 470
           F V +   +     +I ++I  AV    P +   E   T+S GI    S ++ + E L  
Sbjct: 423 FSVILAETDSAGAQQIAEQIRQAV-ENLPWVEGAERAMTVSIGIATWTSASEMTLEQLLF 481

Query: 471 AADEKLYVAKTSGKNQLV 488
           +AD+ LY AK  G+N++V
Sbjct: 482 SADKALYQAKEGGRNRVV 499