Pairwise Alignments

Query, 264 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 12/208 (5%)

Query: 22  LRGVSLEVPEHQFLTVIGSNGAGKSTLLGAVTGETPIVGGQVLIDEIDVTKQSVDQRANL 81
           L+GVSLEV  H  LTV+G NG+GKSTL+ AV G      G++L++  D+T+     RA  
Sbjct: 19  LQGVSLEVVAHGSLTVVGPNGSGKSTLMKAVVGLVLPDKGRILLEGEDITRLDPPGRARR 78

Query: 82  -CARVFQDPLAGTCGALTIEENMALAY-MRGKKRGWSLALSNQRRKLFQERISILGLGLE 139
               V Q+  A    +LT+ EN+ L++     + G S A     R+L  E +  L   +E
Sbjct: 79  GLGHVPQE--ANVFRSLTVAENLRLSFEFIPSRSGASFA-----RRL--EAVLALFPEIE 129

Query: 140 DRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAALDPRMAAFIIDLTKKIVKEFN 199
            +L    GLLSGGQRQ V++  A + E  +L LDE +A L PR A  +     +I K   
Sbjct: 130 PKLKVAAGLLSGGQRQMVAMGAALMPEPSVLALDEPSAGLSPRNAELLFTAIARIAKA-G 188

Query: 200 LTVMMVTHSMKDALACGDRTVMLHQGQI 227
           +T++++  + +  L+  D  ++L  GQ+
Sbjct: 189 VTLLLIEQNTRLGLSIADEGLVLVAGQV 216