Pairwise Alignments

Query, 264 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., KEGG: putative spermidine/putrescine transport system ATP-binding protein from Variovorax sp. SCN45

 Score =  103 bits (257), Expect = 5e-27
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 24/259 (9%)

Query: 9   VTFN-PGTILENRALRGVSLEVPEHQFLTVIGSNGAGKSTLLGAVTGETPIVGGQVLIDE 67
           V +N PG+      L  VSL+V   + + VIG +G+GKSTLL  V+G      G++ +D 
Sbjct: 8   VNYNYPGS---THGLHDVSLDVRTGELVAVIGPSGSGKSTLLKLVSGLETGHTGRIALDG 64

Query: 68  IDVTKQSVDQRANLCARVFQDPLAGTCGALTIEENMALAYMRGKKRGWSLALSNQRRKLF 127
            D+++  V QR      VFQ         L++ +N+A   ++ +K G +     +RR+  
Sbjct: 65  EDMSRTPVHQRN--IGMVFQS--YALFPHLSVLDNVAYG-LKLRKVGTA-----ERRQRA 114

Query: 128 QERISILGLGLEDRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAALDPRMAAFI 187
           QE + I+GLG  D     +  LSGGQ+Q V+L  A   + + LLLDE  +ALD  +   +
Sbjct: 115 QELLDIVGLG--DFSARAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHL 172

Query: 188 IDLTKKIVKEFNLTVMMVTHSMKDALACGDRTVMLHQGQIVLDVTG----EQRANMGVPE 243
            D  + I + FN T ++VTH  ++AL   DR  ML  G+++   T     E  A+  V E
Sbjct: 173 RDQIRSIQQRFNATTLLVTHDQEEALVMADRVAMLKDGRLLQIATPRDIYENPASRAVAE 232

Query: 244 LLEMF----SKVRGEELAD 258
            + +     +KV G +L D
Sbjct: 233 FVGLSTILPAKVSGADLLD 251