Pairwise Alignments

Query, 264 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 1e-28
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 16/236 (6%)

Query: 1   MIRLQDIQVTFNPGTILENRALRGVSLEVPEHQFLTVIGSNGAGKSTLLGAVTGETPIVG 60
           M++++ ++V++  G I    A++GVSLEV   + +T+IG+NGAGKSTLL ++ G  P+  
Sbjct: 1   MLKIESVKVSY--GAI---EAVKGVSLEVRAGEVVTIIGANGAGKSTLLKSIVGLEPVAE 55

Query: 61  GQVLIDEIDVTKQSVDQRANLCARVFQDPLAGTCGALTIEENMAL-AYMRGKKRGWSLAL 119
           G+VLID  D T     +R  L   +  +   G     T+ EN+ L AY R   + +    
Sbjct: 56  GRVLIDGNDCTHVPSHKRVGLGVALSPEG-RGVFPDQTVRENLMLGAYSRRNDKAFVENA 114

Query: 120 SNQRRKLFQERISILGLGLEDRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAAL 179
             +    F          L++R     G LSGG++Q +++  A +SE +LLLLDE +  L
Sbjct: 115 IEREFARFPR--------LKERQHQPSGTLSGGEQQMLAIARALMSEPRLLLLDEPSLGL 166

Query: 180 DPRMAAFIIDLTKKIVKEFNLTVMMVTHSMKDALACGDRTVMLHQGQIVLDVTGEQ 235
            P +   I D  +++ +   LT+++V    K AL   DR  +L  G I L+ +G +
Sbjct: 167 APLIIKDIFDAIRQL-RSSGLTILLVEQMAKQALGVADRAYVLETGCITLEGSGRE 221