Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 46/292 (15%)

Query: 20  FGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAVAATAIVAGINPWVATGLAI 79
           F  + LG++Y ++A G  LTF   D  +     +  +GA V  T +  G+N W+   L  
Sbjct: 9   FSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLTLVNMGLNYWLMIPLVC 68

Query: 80  LAGAATGWVTAFLSVRCGIL------HLLASILTMIAAFSINIRIMGRPNLALLGEDTIL 133
           L GA  G V   ++VR  I        ++++I   I   ++   + GR +L         
Sbjct: 69  LFGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAENVWGRDDLKF-PSPLPE 127

Query: 134 TPFEALGDPVLIRPLVVAVLVVISALLV---IRLLN--SDFGLGLRATGVNARMVAAQGA 188
           +P   LG  VL     + +LVVI ALL+   + L N  S +G  + AT  +       G 
Sbjct: 128 SPLHFLGANVL----PMEILVVIGALLMMLAVELFNRRSIYGKAVVATFNDRDAAKLMGI 183

Query: 189 STAFYTYFCLALSNGFVGFAGALFAQ-------------TNSFA-----DVTSG----VG 226
           +T     F  ALS+    FAG L A                +FA      +TSG    VG
Sbjct: 184 NTGLVITFSYALSSMTAAFAGVLIAPLTLTGASMGAVLGLKAFAVAIIGGLTSGMGIVVG 243

Query: 227 TIVVGLAAVILGQTLIPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQA 278
            I++G+A    G  L  G K    +V +++        V     SG+FG  A
Sbjct: 244 GIILGIAETTTGFYLSTGYKDVPGLVLLLI--------VLAVRPSGLFGKAA 287