Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 50/281 (17%)

Query: 47  DLSVDGSFPMGAAVAATAIVAGINPWVATGLAILAGAATGWVTAFLSVRCGILHLLASIL 106
           D+ ++G    GA  +A    A +NPW    L +LAG A G       V   I+H  A I 
Sbjct: 39  DIGLEGKMLAGAFFSAAVASATLNPW----LGLLAGIAAG-------VALAIVHGFACIT 87

Query: 107 ----TMIAAFSINIRIMG-RPNLALL----GEDTILTPFEAL-------------GDPVL 144
                +++  +INI + G  P LA      G  T L P +A              G PVL
Sbjct: 88  HNGNQVVSGMAINILVAGLAPTLAYAWFQQGGQTPLLPNQARIPAVELPGVEALSGVPVL 147

Query: 145 ---IRPLVVA--VLVVISALLVIR----LLNSDFGLGLRATGVNARMVAAQGASTAFYTY 195
               R L+    VL+ ++ +LVI     L  S FGL LRA G N   V   G S A   Y
Sbjct: 148 GPVYRELLNGNNVLIWVTLVLVIATHWVLYRSRFGLRLRAVGENPAAVDTAGLSVAKLRY 207

Query: 196 FCLALSNGFVGFAGALFAQTNS---FADVTSGVGTIVVGLAAVILGQTLIPGRKIWVAVV 252
             L ++    G AG+  +  +      D+T+G G   + LAA+I G+   PG  ++  ++
Sbjct: 208 QALLVTGVLTGMAGSYLSTGHGAGFVRDMTAGKG--YLALAALIFGKWR-PGPTLFACLL 264

Query: 253 AVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALAL 293
                +V  RL        G+  +Q   + ++  VL  L L
Sbjct: 265 FAFTDAVQVRLQGVVLPGIGVIPVQF--IQMLPYVLTVLLL 303