Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  353 bits (906), Expect = e-102
 Identities = 183/288 (63%), Positives = 227/288 (78%), Gaps = 1/288 (0%)

Query: 14  MSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAVAATAIVAGINPWV 73
           MS  AF+GA+ELGL++  VA+GVYL FRVLDFPDL+VDGSFP+GAAVAA  I+AG+N WV
Sbjct: 1   MSQIAFWGAVELGLVFAFVAIGVYLAFRVLDFPDLTVDGSFPLGAAVAAVLIIAGLNAWV 60

Query: 74  ATGLAILAGAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMGRPNLALLGEDTIL 133
           AT +A++AGAA G VTA L+VR  IL+LLASILTMIA FS+N+R+MG+PN+ALL +DT++
Sbjct: 61  ATAIAMVAGAAAGMVTATLNVRFKILNLLASILTMIALFSVNLRVMGKPNVALLNQDTMV 120

Query: 134 TPFEALG-DPVLIRPLVVAVLVVISALLVIRLLNSDFGLGLRATGVNARMVAAQGASTAF 192
           +PF  LG    L+RPL V VLV+I+ +LV R L SD GL +RATG NARM  AQG  T  
Sbjct: 121 SPFYGLGLSEYLVRPLFVGVLVLIAVILVWRFLESDAGLAMRATGANARMARAQGVKTGN 180

Query: 193 YTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQTLIPGRKIWVAVV 252
             Y  +ALSN  V   GALFAQTN FADVTSGVGTIVVGLAAVI+G+TL   R I +A++
Sbjct: 181 QIYLGMALSNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLFGARGILIALI 240

Query: 253 AVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKR 300
             + GS+ YRLA+  ALSS + GL+ASDLN VTAVLVA+ALI+P+++R
Sbjct: 241 GCVFGSIAYRLAIQLALSSDVLGLKASDLNFVTAVLVAIALILPRLRR 288