Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)

Query: 93  VGIATP-TAQALVSATKTIPIVFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVEL 151
           +G+A P  A       + IP+VF  V  PV  K+   L   G+NVTG   + P +  +  
Sbjct: 120 LGVAGPYDAPPTAGFVRDIPVVFALVAAPVQVKIAPSLASSGRNVTGAVHVVPTDVQLRA 179

Query: 152 IKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAI-- 209
           ++      K +GV+Y+P E+N+V++++ +K  A   G +++ A  L     +     +  
Sbjct: 180 MQS-YKAFKKVGVIYSPNESNSVAIIDEMKAFAGTIGAEVL-AQPLTMVGNKPTGDGVED 237

Query: 210 ------AEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAATSYVERG-AIASLGFDY 262
                 A+ ++ +Y   D  +A+  + +  AA  A  P FGA   ++  G  +  L   Y
Sbjct: 238 FVRNLKAQGAEWLYLPADTFLATIFDRVGPAALAAGLPTFGATEFFLREGLGLVGLVSRY 297

Query: 263 YQIGVQTADYVAAIL-EGKEPGSLDVQVAKGSDLVINKTAAEQLGITIPEAVL 314
           Y +G   A   A IL +   P  + ++  K   L+IN   A+QLG+  P A+L
Sbjct: 298 YSVGQLAASKAAEILVQHVPPQDIPIETLKRFALIINMNVAKQLGVYPPIAML 350