Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., ABC transporter, substrate-binding protein PA3836 from Variovorax sp. SCN45

 Score =  317 bits (812), Expect = 2e-91
 Identities = 164/312 (52%), Positives = 226/312 (72%), Gaps = 2/312 (0%)

Query: 12  LAGAALLSSQSIMAKTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ 71
           LA   L ++ S  A T  VAV+ IVEHPALDA R G+   LKA GYEEGKNL+F Y++AQ
Sbjct: 3   LALGMLAAAPSFAADTKSVAVTAIVEHPALDAVRDGVKAELKASGYEEGKNLKFTYQSAQ 62

Query: 72  GNPAIAVQIARQFVGENPDVLVGIATPTAQALVSATKTIPIVFTAVTDPVGAKLVKQLEQ 131
           GN   A QIAR++VG+ PDV+V IATP+AQA+V++TKTIP+V++A+TDPV AKLVK  + 
Sbjct: 63  GNVGTAAQIARKYVGDAPDVIVAIATPSAQAVVASTKTIPVVYSAITDPVAAKLVKNWDA 122

Query: 132 PGKNVTGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKL 191
            G NVTG+SDLSP+E+HV LIK+++P  K IGV+Y+PGEAN+V+++E LK +A+  G+ +
Sbjct: 123 TGTNVTGVSDLSPLEKHVALIKQVVPAAKRIGVIYSPGEANSVAIVESLKKAASAAGMTV 182

Query: 192 VEATALKSADVQSATQAIAEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAATSYVE 251
            EA A ++ DV +A Q++  K+DVIY   DN V SA EG++  A QAK PV  A T+ VE
Sbjct: 183 AEAAAARTVDVPTAAQSLVGKADVIYTPTDNNVVSAFEGIVKVAQQAKLPVVAADTATVE 242

Query: 252 RGAIASLGFDYYQIGVQTADYVAAILEGKEPGSLDVQVAKGSDLVINKTAAEQLGITIPE 311
           RGA+A+LG +Y  IG QT   V  IL+G++PG++  Q +   +LV+N  AA+  G+T+ +
Sbjct: 243 RGAVAALGLNYSDIGRQTGKIVVRILKGEKPGTIASQTSTNFELVVNPGAAKLQGVTLSD 302

Query: 312 AVL--ARATSTK 321
            +L  A+  STK
Sbjct: 303 ELLKTAKVVSTK 314