Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 22/282 (7%)

Query: 60  GKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATPTAQALVSA---------TKTI 110
           G   + D +  Q   A+A  +        PD+++ + TP   A V              +
Sbjct: 74  GMQAKIDVREVQQASAVAGMLP-DIRAARPDLVLTVFTPLTLATVGRYDDPDPSKFLTDV 132

Query: 111 PIVFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGE 170
           P+VFT+VTDPV +++V+ LEQPG+ VTG   ++PV   ++ +       K I  VYNP E
Sbjct: 133 PVVFTSVTDPVASRIVRSLEQPGRAVTGTRHIAPVAVQLKTML-AYRRWKKIAAVYNPAE 191

Query: 171 ANAVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAIAE--------KSDVIYALIDN 222
            N V  +  LK  AA+ G+++++    +    +    AI +         +++IY   D 
Sbjct: 192 ENMVVAVRDLKEEAARQGVEIIDGAVPRDGAGRPNPDAIPDLIRDVARAGAELIYIGPDT 251

Query: 223 TVASAIEGMIVAANQAKTPVFGAATSYVER--GAIASLGFDYYQIGVQTADYVAAILEGK 280
            VAS     +  A  A       +T    R  G +  L      +G         IL G 
Sbjct: 252 LVASNNSQAVADAALANNVATFCSTELPIRRSGLLMGLVSPAVNVGRFAGLKAYDILNGA 311

Query: 281 EP-GSLDVQVAKGSDLVINKTAAEQLGITIPEAVLARATSTK 321
           +P  ++ V+      L++    A++L +  P  +L  A   K
Sbjct: 312 KPAAAIPVETLNRFSLLLRINTAKRLDLYPPMRLLNIAEIVK 353