Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  294 bits (753), Expect = 2e-84
 Identities = 159/318 (50%), Positives = 207/318 (65%), Gaps = 11/318 (3%)

Query: 15  LDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAII 74
           L+V+DL V +          T    L AVDGV+  +  GETLG+VGESGCGKS+ A+AI+
Sbjct: 10  LEVRDLVVSYR---------TGRGPLSAVDGVSFAIRPGETLGLVGESGCGKSSLAKAIV 60

Query: 75  GLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTF 134
            LV+ T G +   G D+T +    RRA R ++QM+FQDP+ +L+PR   G I+  PL+  
Sbjct: 61  QLVEPTSGALKVEGHDITGLTARARRALRPKVQMVFQDPMGALDPRQRAGTILETPLK-L 119

Query: 135 YPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDEP 194
                K   + RV  +M  VGL P  I+R PHEFSGGQ QRIGIARAL L P +I+CDEP
Sbjct: 120 NGVRGKAARRARVASLMEAVGLRPEFIDRLPHEFSGGQRQRIGIARALALDPAVIVCDEP 179

Query: 195 VSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKE 254
           VSALDVS+QAQV+NLL+++Q+E  ++ +FI+HDLSVV+HI+DRV +MYLG  VEL   + 
Sbjct: 180 VSALDVSLQAQVLNLLRKVQRETSVAYLFISHDLSVVEHIADRVAIMYLGRIVELAPRET 239

Query: 255 LFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAEC 314
           L+  P HPYT+AL+ A+P  DP   R     ++ GDLPSP  PP GC F TRCP A   C
Sbjct: 240 LWHAPLHPYTRALIEALPRMDPGASRIADKTIVGGDLPSPFAPPKGCRFHTRCPIAVGRC 299

Query: 315 AKTKPVIK-GSDIHSVSC 331
           A   P +    D H V+C
Sbjct: 300 AIDAPALSDAGDGHLVAC 317