Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Oligopeptide transport ATP-binding protein OppF from Xanthobacter sp. DMC5

 Score =  286 bits (731), Expect = 6e-82
 Identities = 147/283 (51%), Positives = 197/283 (69%), Gaps = 5/283 (1%)

Query: 40  LKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKR 99
           L+AVDGV+  +  GET+G+VGESGCGKS+ A+ I+ LV    G VV+ G D+  ++    
Sbjct: 20  LRAVDGVSFAVEPGETVGLVGESGCGKSSLAKVIMRLVSPASGRVVFDGVDVGGLEGAPL 79

Query: 100 RATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPN 159
           +A R+Q Q++FQDP ASLNPR ++ DI+  PL   +  + + E      + + +VGL   
Sbjct: 80  KAYRRQAQIVFQDPFASLNPRQSIADILTAPLAV-HGLVPRGERLKAAGDALERVGLPRE 138

Query: 160 VINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGL 219
            ++RYPHEFSGGQ QR+GIARALIL P+++ICDEPVSALD+SIQAQ++NLL  L+ ELGL
Sbjct: 139 ALSRYPHEFSGGQRQRLGIARALILFPRLVICDEPVSALDLSIQAQILNLLARLKAELGL 198

Query: 220 SLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNIE 279
           S +FI+HDLSVV++ +DRVLVMYLG  VE G  + +FA P HPYT+AL+ AVP P     
Sbjct: 199 SYLFISHDLSVVRYFADRVLVMYLGRIVETGSWQSIFARPLHPYTRALIEAVPTPG---- 254

Query: 280 RNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKPVIK 322
           R +    L GDLPS  N P+GC F  RCP AT  C ++ P ++
Sbjct: 255 RRRHAAPLSGDLPSARNVPTGCRFHPRCPLATPLCTQSDPALR 297