Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  275 bits (703), Expect = 1e-78
 Identities = 158/329 (48%), Positives = 216/329 (65%), Gaps = 23/329 (6%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL V  L  HF   P     + +  T++AVD V+  + +GETLG+VGESGCGKST AR +
Sbjct: 17  LLAVNSLTKHF---PIGGGLFAEKKTVRAVDDVSFTVAKGETLGIVGESGCGKSTTARLL 73

Query: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133
           + L+  T GE+++ GQ +     V  R  R+ +QM+FQD  ASLNPR+T+ D IA     
Sbjct: 74  MHLMPRTSGEILFDGQVVGYSLSV--REFRRGMQMVFQDSYASLNPRLTIEDSIA----- 126

Query: 134 FYPEL---SKQEVKDRVKEMMAKVGLLPNVI-NRYPHEFSGGQCQRIGIARALILKPKMI 189
           F P++   S +E +   +E+M KVGL P V  NRYPHE SGGQ QR+ IARAL LKP+++
Sbjct: 127 FGPKVHGVSDKEARALARELMGKVGLRPEVFANRYPHEVSGGQRQRVNIARALALKPRLV 186

Query: 190 ICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVEL 249
           I DE VSALD S++AQV+NLL +L+ E GL+ VFI+HDL+VV++ISDRVLVMYLG  VE+
Sbjct: 187 ILDEAVSALDKSVEAQVLNLLTDLKHEFGLTYVFISHDLNVVRYISDRVLVMYLGQVVEV 246

Query: 250 GVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQ 309
           G   +++  P HPYT+AL++A+P  DP+ +R +T   L GD P+P++PP+GC F TRC  
Sbjct: 247 GPVDQVWEAPAHPYTRALLAAMPALDPD-KRTET-PPLSGDPPNPIDPPAGCRFHTRCSF 304

Query: 310 ATAECAKTKPVIK-------GSDIHSVSC 331
           A   C +  P +          D H  +C
Sbjct: 305 AEEVCGRVGPALSPATPGDTAPDAHLAAC 333